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Mostrando postagens com marcador Biology. Mostrar todas as postagens

terça-feira, 21 de outubro de 2014

Untangling the biological effects of blue light

 


Drs. Aguirre and Brainard and graduate student Spitschan found that melanopsin, a protein and short wave-sensitive S-cones, both in the retina have opposite effects and compete for control of the pupil in response to blue light.

Blue light can both set the mood and set in motion important biological responses. Researchers at the University of Pennsylvania's School of Medicine and School of Arts and Sciences have teased apart the separate biological responses of the human eye to blue light, revealing an unexpected contest for control. Their work addresses the properties of melanopsin, a light-sensitive protein in the eye that establishes the rhythm of our day-night cycle and the familiar constriction of the pupil to bright light. They measured the pupil response to stimulation of melanopsin and of short-wave-sensitive (S) cones, the other blue light-sensing cells that operate in daylight. Surprisingly, they found that melanopsin and S-cones have opposite effects and compete for control of the pupil in blue light. Their complete results are published in the current issue of PNAS.

Drs. Aguirre and Brainard and graduate student Spitschan found that melanopsin, a protein and short wave-sensitive S-cones, both in the retina have opposite effects and compete for control of the pupil in response to blue light.

"The challenge of studying melanopsin is that it is very sensitive to blue light, a short-wave light emitted by digital devices including smartphones, tablets, and computers, as are S-cones," says lead author, Manuel Spitschan, a Penn graduate student in psychology. "Previous studies in the human eye have not separately studied the S-cones and melanopsin because flashing a blue light stimulates both of these cells, so we didn't know if what a person saw or the response of the pupil was from one or both." To overcome this problem, the Penn team developed a special class of visual stimuli: they produced flickering light that stimulates melanopsin but is invisible to S-cones, and a second flickering light that stimulates S-cones but is invisible to melanopsin. The lights were created using a machine that can sculpt and switch between computer-designed rainbows of light.

The researchers had 16 people watch this flickering light while the response of their pupil was recorded. The light that stimulates melanopsin made the pupil slowly contract. To their surprise, they also discovered that stimulation of S-cones made the pupil get larger. That is, when the S-cones of the eye captured more light, the pupil enlarged, the opposite of what is generally thought of as the natural pupil response. This means that blue light sets off a tug-of-war between melanopsin and S-cones to make your pupil smaller or bigger. The melanopsin effect is stronger, resulting in the familiar shrinking of the pupil to bright light of any color.

"For the first time in people we are able to probe the relationship between melanopsin signals and the cones and how they work together or in opposition," says David Brainard, PhD, RRL professor of Psychology, director of the Vision Research Center and director of the Institute for Research in Cognitive Science. And what do these special flickering lights look like? "The flicker that stimulates S-cones looks like it is switching between a bluish and yellowish color. The flicker that stimulates melanopsin, however, is hard to see, and looks like a soft glow that rises and falls in brightness."

Light enters the human eye and is imaged on the retina. It has long been know that the retinal image is sensed by neurons known as the rods and cones. The rods operate in dim light levels and allow us to see at night. It is the signals from rods and cones that the brain converts into the images we see. Recently, though, another class of retinal cells has been identified that also senses light. These cells are known as intrinsically photosensitive ganglion cells, and they contain the protein melanopsin. Melanopsin is sensitive to light at wavelengths intermediate to those sensed by the S and M cones. It appears that it primarily mediates light-driven functions other than conscious vision, such as setting our circadian clock and contributing to control of the pupil.

The work of the Penn team makes it possible to isolate and study the properties of melanopsin in people, separate from the cone cells. We can now ask what we "see" with melanopsin.

"This is important because we think melanopsin could be involved in clinical conditions," says Geoffrey K. Aguirre, MD, PhD, a behavioral neurologist and associate professor in the department of Neurology. "For example, it seems that too much stimulation of melanopsin produces the feeling of pain from light that is too bright, and not having enough melanopsin stimulation may be part of seasonal affective disorder, in which people become depressed when they don't have enough light exposure. Having now teased apart the melanopsin and cone responses to blue light, we can study how the eye is involved in these disorders."

A patent on this alternative photoreceptor isolation method and its applications has been filed by the University of Pennsylvania with Spitschan, Aguirre and Brainard as inventors. In addition, they have founded a company with the Penn UpStart incubator with the goal to commercialize a device based upon these techniques. This work was supported by NIH grants R01 EY020516, R01 EY10016 and P30 EY001583.


Story Source:

The above story is based on materials provided by University of Pennsylvania School of Medicine. Note: Materials may be edited for content and length.


Journal Reference:

  1. M. Spitschan, S. Jain, D. H. Brainard, G. K. Aguirre. Opponent melanopsin and S-cone signals in the human pupillary light response. Proceedings of the National Academy of Sciences, 2014; DOI: 10.1073/pnas.1400942111

 

domingo, 6 de julho de 2014

Biological signal processing: Body cells -- instrumentalists in a symphony orchestra


Like an isolated note in a symphony orchestra, an isolated signal in the cell is of subordinate importance.

Every organism has one aim: to survive. Its body cells all work in concert to keep it alive. They do so through finely tuned means of communication. Together with cooperation partners from Berlin and Cambridge, scientists at the Luxembourg Centre for Systems Biomedicine (LCSB) of the University of Luxembourg have now successfully revealed for the first time the laws by which cells translate signals from their surroundings into internal signals. Like an isolated note in a symphony orchestra, an isolated signal in the cell is of subordinate importance. "What is important is the relative variation of intensity and frequency at which the signals are transmitted from the cell membrane into the cell," says Dr. Alexander Skupin, who led the studies at LCSB. The research group published their results now in the scientific journal Science Signaling.

The instruments in an orchestra produce signals -- musical notes -- by causing the air to vibrate. Inside a cell, calcium ions carry signals. When a piece of information from the environment -- say a biological messenger -- meets the outer envelope of the cell, calcium ions are released inside the cell. There, they control various adaptation processes. "At first sight, there is no simple pattern to the ion impulses," Skupin explains; "yet they still culminate in a meaningful response inside the cell, like the activation of a specific gene, for instance."

In order to determine the laws underlying this phenomenon, the researchers studied human kidney cells and rat liver cells using a combination of imaging technologies and mathematical methods. They discovered that the intensity and frequency of calcium impulses undergo extreme variation -- both cell-internally and cell-to-cell. Accordingly, the information they convey cannot be interpreted by analyzing isolated signals alone. "It's like in an orchestra, where studying an isolated note on its own allows no inference of the melody," Skupin continues the musical analogy. "You have to hear how the frequency and volume of all instruments vary and produce the melody. Then you gain an impression of the musical piece."

Now, for the first time, the researchers have managed to gain such an impression of the whole by listening in on the cells' communications. They discovered that the plethora of calcium impulses vary relatively to one another in a specific relationship: A stimulus from outside does not lead to an absolute increase in calcium impulses, but instead to a change in the frequency at which they occur -- in the concert hall, the notes of the instruments rise and fall in symphony. "This pattern is the actual signal that leads to a response in the cells," Skupin says. "With our analyses, we have rendered it interpretable."

"The results are of great importance for analyzing diseases," says Director of LCSB Prof. Dr. Rudi Balling. "We know that, in Parkinson's disease, the calcium balance in the nerve cells is disrupted, and suspect that errant communications between the cells could play a role in the onset of neurodegenerative diseases. With the discovery of the fundamental laws of these communications, as Alexander Skupin, his team and our cooperation partners have now achieved, we are set to take a major step forward in the analysis of Parkinson's disease."


Story Source:

The above story is based on materials provided by University of Luxembourg. Note: Materials may be edited for content and length.


Journal Reference:

  1. K. Thurley, S. C. Tovey, G. Moenke, V. L. Prince, A. Meena, A. P. Thomas, A. Skupin, C. W. Taylor, M. Falcke. Reliable Encoding of Stimulus Intensities Within Random Sequences of Intracellular Ca2 Spikes. Science Signaling, 2014; 7 (331): ra59 DOI: 10.1126/scisignal.2005237

sexta-feira, 18 de abril de 2014

Uniter of Sperm and Egg Is Found

 

 

A newly discovered protein is found to play a crucial role in conception

sperm meets egg

Credit: frentusha via Thinkstock

Scientists have identified a long-sought fertility protein that allows sperm to dock to the surface of an egg. The finding, an important step in understanding the process that enables conception, could eventually spawn new forms of birth control and treatments for infertility.“It’s very important, because we now know two of the proteins that are responsible for the binding of sperm to the egg,” says Paul Wassarman, a biochemist and developmental biologist at the Icahn School of Medicine at Mount Sinai in New York.

The work, published today in Nature, was led by Gavin Wright, a biochemist at the Wellcome Trust Sanger Institute in Hinxton, UK. He and his team were looking for a counterpart to a protein called Izumo1, discovered in 2005 on the surface of sperm cells.

Scientists knew that Izumo1 allowed sperm to join to an egg to begin the process of fertilization. But nobody knew what protein on the surface of the egg attached to Izumo1.

Identifying the proteins involved in the joining step has been difficult because the molecules tend to bind quite weakly to each other. So Wright and his team devised a way to cluster Izumo1 proteins, then searching for the egg-cell proteins that would bind to the clusters in cell culture. Wright compares the technique to constructing a Velcro fastener out of many individual fabric loops: “Each small hook adheres weakly, but when [they are] clustered in an array, even the most fleeting interactions are stabilized and can therefore be detected,” he says.

Using this method, the team hooked a protein called folate receptor 4 that is found on the surface of the mouse egg cell. Wright’s team propose renaming the egg protein Juno, after the Roman goddess of fertility and marriage. Izumo1 is also named after a cultural symbol of reproduction — a Japanese marriage shrine.

The team found that Juno also exists in mammals, including humans, and that without it, human eggs and sperm cannot fuse. They also found that female mice lacking Juno are healthy, but unable to reproduce. This makes the Juno–Izumo1 partnership the first discovered in any organism to be essential to reproduction, the researchers say.

Wright and his team also found that Juno has another important job — blocking other sperm cells from joining to the egg once it has been fertilized. After one sperm cell joined to the egg, Juno disappeared from the egg surface within 30–45 minutes.

The findings could be used right away in fertility treatment, Wright says. Women who are having trouble conceiving could be tested to find whether they have missing or defective Juno proteins. If they do, they could try intracytoplasmic sperm injection, in which a single sperm cell is injected into an egg. But the number of women who would benefit is unknown, because Juno has not yet been studied in connection with fertility.

The discovery also points to potential ways to block the fusion of sperm and egg to prevent pregnancy. Scientists could now study the structure of the Juno–Izumo1 complex, and perhaps develop a new class of contraceptive drugs that interfere with this junction, Wassarman says.

This article is reproduced with permission from the magazine Nature. The article was first published on April 16, 2014.

A Happy Life May not be a Meaningful Life - Scientific American - Mozilla Firefox 2014-02-19 18.42.38

sexta-feira, 14 de março de 2014

RHDV Virus Structure Determined

 

http://www.nsf.gov/news/mmg/media/images/PF3295_red_h.jpg
Atomic model of rabbit hemorrhagic disease virus (RHDV) capsid. Simulations carried out using the Blue Waters petascale supercomputer at the National Center for Supercomputing Applications (NCSA) have determined the structure of RHDV (belonging to the genus Lagovirus), which causes a highly infectious and often fatal illness in domestic and wild rabbits. The research was a collaboration involving the University of Illinois (UI) at Urbana-Champaign, the University of California, San Diego, and several Chinese research institutions. According to researchers, this “provides a reliable, pseudo-atomic model of a Lagovirus and suggests a new candidate for an efficient vaccine that can be used to protect rabbits from RHDV infection.
Klaus Schulten, a biophysicist with the Theoretical and Computational Biophysics Group at UI-Urbana-Champaign, co-authored the study, which was published in PLOS Pathogens. Computing capabilities were supported by a grant from the National Science Foundation (grant OCI 07-25070).To learn more about this research, see the NCSA news story U.S.-China team determines structure of virus with Blue Waters. (Date of Image: November 2012)

Credit: Yanxin Liu and Klaus Schulten, Beckman Institute, University of Illinois at Urbana-Champaign; Fei Sun, Institute of Biophysics, Chinese Academy of Sciences
nsf.gov - Multimedia Gallery - US National Science Foundation (NSF) - Mozilla Firefox 2013-12-25 09.59.25

sábado, 22 de fevereiro de 2014

1986 NMS Awardee reflects on her excitement being a part of the 20th century revolution in biology.

 

Biologist and 1986 National Medal of Science medalist Joan A. Steitz describes her excitement about being involved in the 20th Century revolution in biology, her contributions, and implications for health and future discoveries, as well as her perspective as one of the few women in the field in its earlier days

 

nsf.gov - Multimedia Gallery - US National Science Foundation (NSF) - Mozilla Firefox 2014-02-22 11.42.59